Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:114966652-115166669

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79 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cia40 11 103383166 to 115130618 11747452 QTL collagen induced arthritis QTL 40
Tssr105827 11 114982360 to 114982409 49 + TSS region transcription start site region 105827
Cd300ld 11 114982443 to 114989886 7443 - protein coding gene CD300 molecule like family member d
Tssr111689 11 114982525 to 114982559 34 - TSS region transcription start site region 111689
Tssr111690 11 114982609 to 114982616 7 - TSS region transcription start site region 111690
Tssr105828 11 114982611 to 114982630 19 + TSS region transcription start site region 105828
Tssr111691 11 114982618 to 114982636 18 - TSS region transcription start site region 111691
Tssr111692 11 114982726 to 114982747 21 - TSS region transcription start site region 111692
Tssr111693 11 114982765 to 114982782 17 - TSS region transcription start site region 111693
Tssr111694 11 114982907 to 114982918 11 - TSS region transcription start site region 111694
Tssr111695 11 114982981 to 114982994 13 - TSS region transcription start site region 111695
Tssr111696 11 114983002 to 114983023 21 - TSS region transcription start site region 111696
Tssr105829 11 114983012 to 114983025 13 + TSS region transcription start site region 105829
Tssr105830 11 114983027 to 114983042 15 + TSS region transcription start site region 105830
Tssr111697 11 114983075 to 114983092 17 - TSS region transcription start site region 111697
Tssr111698 11 114983106 to 114983114 8 - TSS region transcription start site region 111698
Tssr111699 11 114983124 to 114983137 13 - TSS region transcription start site region 111699
Tssr111700 11 114983144 to 114983153 9 - TSS region transcription start site region 111700
Tssr111701 11 114983204 to 114983205 1 - TSS region transcription start site region 111701
Tssr111702 11 114983208 to 114983220 12 - TSS region transcription start site region 111702
Tssr111703 11 114983352 to 114983363 11 - TSS region transcription start site region 111703
Tssr111704 11 114983580 to 114983594 14 - TSS region transcription start site region 111704
Tssr111705 11 114983597 to 114983611 14 - TSS region transcription start site region 111705
Tssr105831 11 114983812 to 114983823 11 + TSS region transcription start site region 105831
Tssr105832 11 114983828 to 114983864 36 + TSS region transcription start site region 105832
Tssr111706 11 114983898 to 114983935 37 - TSS region transcription start site region 111706
Tssr111707 11 114984028 to 114984052 24 - TSS region transcription start site region 111707
Tssr111708 11 114984245 to 114984267 22 - TSS region transcription start site region 111708
Tssr111709 11 114989854 to 114989919 65 - TSS region transcription start site region 111709
Tssr105833 11 114996721 to 114996728 7 + TSS region transcription start site region 105833
Cd300c2 11 114996769 to 115001880 5111 - protein coding gene CD300C molecule 2
Tssr105834 11 114998360 to 114998384 24 + TSS region transcription start site region 105834
Tssr105835 11 114998912 to 114998927 15 + TSS region transcription start site region 105835
Tssr111710 11 114999259 to 114999282 23 - TSS region transcription start site region 111710
Tssr111711 11 115001587 to 115001638 51 - TSS region transcription start site region 111711
Tssr111712 11 115001642 to 115001645 3 - TSS region transcription start site region 111712
Tssr111713 11 115004092 to 115004105 13 - TSS region transcription start site region 111713
Tssr111714 11 115004186 to 115004202 16 - TSS region transcription start site region 111714
Cd300ld2 11 115010335 to 115016193 5858 - protein coding gene CD300 molecule like family member D2
Cd300ld4 11 115020728 to 115027012 6284 - protein coding gene CD300 molecule like family member D4
Cd300ld5 11 115031486 to 115037769 6283 - protein coding gene CD300 molecule like family member D5
Tssr3726 11 115037719 to 115037748 29 - TSS region transcription start site region 3726
Cd300ld3 11 115042131 to 115048409 6278 - protein coding gene CD300 molecule like family member D3
Tssr111715 11 115048328 to 115048371 43 - TSS region transcription start site region 111715
Tssr111716 11 115048372 to 115048399 27 - TSS region transcription start site region 111716
Cd300e 11 115051917 to 115062177 10260 - protein coding gene CD300E molecule
Tssr111717 11 115062109 to 115062121 12 - TSS region transcription start site region 111717
Tssr111718 11 115062124 to 115062156 32 - TSS region transcription start site region 111718
Tssr111719 11 115062158 to 115062169 11 - TSS region transcription start site region 111719
Tssr111720 11 115066652 to 115066669 17 - TSS region transcription start site region 111720
Tssr111721 11 115066691 to 115066711 20 - TSS region transcription start site region 111721
Cpgi4107 11 115091326 to 115092092 766 CpG island CpG island 4107
Rab37 11 115091431 to 115162236 70805 + protein coding gene RAB37, member RAS oncogene family
Tssr105836 11 115091837 to 115091857 20 + TSS region transcription start site region 105836
Cd300lf 11 115116214 to 115133992 17778 - protein coding gene CD300 molecule like family member F
Tssr111722 11 115116632 to 115116674 42 - TSS region transcription start site region 111722
Tssr111723 11 115123643 to 115123689 46 - TSS region transcription start site region 111723
Tssr111724 11 115125918 to 115125943 25 - TSS region transcription start site region 111724
D11Dcr29 11 115130458 to 115130619 161 DNA segment DNA Segment, Chr 11, Derry C. Roopenian 29
D11Mit214 11 115130471 to 115130618 147 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 214
Tssr111725 11 115133906 to 115133916 10 - TSS region transcription start site region 111725
Tssr111726 11 115133921 to 115133927 6 - TSS region transcription start site region 111726
Tssr111727 11 115133928 to 115133949 21 - TSS region transcription start site region 111727
Tssr111728 11 115133955 to 115133966 11 - TSS region transcription start site region 111728
Tssr111729 11 115133981 to 115133996 15 - TSS region transcription start site region 111729
Tssr105837 11 115134040 to 115134049 9 + TSS region transcription start site region 105837
Cpgi4108 11 115153763 to 115154390 627 CpG island CpG island 4108
Tssr105838 11 115154139 to 115154194 55 + TSS region transcription start site region 105838
Tssr105839 11 115154202 to 115154210 8 + TSS region transcription start site region 105839
Cpgi4109 11 115162920 to 115164329 1409 CpG island CpG island 4109
Tssr111730 11 115163129 to 115163135 6 - TSS region transcription start site region 111730
Tssr105840 11 115163333 to 115163348 15 + TSS region transcription start site region 105840
Slc9a3r1 11 115163341 to 115181178 17837 + protein coding gene solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1
Tssr3727 11 115163356 to 115163371 15 + TSS region transcription start site region 3727
Tssr105841 11 115163374 to 115163383 9 + TSS region transcription start site region 105841
Tssr105842 11 115163400 to 115163413 13 + TSS region transcription start site region 105842
Tssr105843 11 115163417 to 115163419 2 + TSS region transcription start site region 105843
Tssr105844 11 115163438 to 115163449 11 + TSS region transcription start site region 105844
Cpgi4110 11 115164734 to 115165134 400 CpG island CpG island 4110