Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:106226045-106286103

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26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ddx42 11 106216926 to 106249139 32213 + protein coding gene DEAD (Asp-Glu-Ala-Asp) box polypeptide 42
Tssr105506 11 106230665 to 106230666 1 + TSS region transcription start site region 105506
Ftsj3 11 106249144 to 106255802 6658 - protein coding gene FtsJ RNA methyltransferase homolog 3 (E. coli)
Cpgi4019 11 106255235 to 106256380 1145 CpG island CpG island 4019
Tssr111306 11 106255780 to 106255837 57 - TSS region transcription start site region 111306
Tssr111307 11 106256045 to 106256103 58 - TSS region transcription start site region 111307
Tssr105507 11 106256124 to 106256135 11 + TSS region transcription start site region 105507
Tssr105508 11 106256140 to 106256172 32 + TSS region transcription start site region 105508
Tssr105509 11 106256173 to 106256189 16 + TSS region transcription start site region 105509
Psmc5 11 106256185 to 106263112 6927 + protein coding gene protease (prosome, macropain) 26S subunit, ATPase 5
D11Mit127 11 106259371 to 106259519 148 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 127
Gm23645 11 106260206 to 106260313 107 + snRNA gene predicted gene, 23645
Tssr105510 11 106262216 to 106262238 22 + TSS region transcription start site region 105510
Smarcd2 11 106263179 to 106272972 9793 - protein coding gene SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2
Tssr111308 11 106267605 to 106267619 14 - TSS region transcription start site region 111308
Tssr111309 11 106267622 to 106267641 19 - TSS region transcription start site region 111309
Tssr111310 11 106272029 to 106272035 6 - TSS region transcription start site region 111310
Cpgi4020 11 106272146 to 106273706 1560 CpG island CpG island 4020
Tssr111311 11 106272706 to 106272814 108 - TSS region transcription start site region 111311
Tssr111312 11 106272830 to 106272860 30 - TSS region transcription start site region 111312
Tssr111313 11 106272927 to 106273006 79 - TSS region transcription start site region 111313
Cpgi4021 11 106276371 to 106276911 540 CpG island CpG island 4021
Tssr105511 11 106276651 to 106276688 37 + TSS region transcription start site region 105511
Tcam1 11 106276672 to 106288745 12073 + protein coding gene testicular cell adhesion molecule 1
Tssr105512 11 106276691 to 106276702 11 + TSS region transcription start site region 105512
Tssr105513 11 106276715 to 106276727 12 + TSS region transcription start site region 105513