Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:103360962-103390969

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18 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Arhgap27 11 103331497 to 103363692 32195 - protein coding gene Rho GTPase activating protein 27
Arhgap27os2 11 103355701 to 103361092 5391 + antisense lncRNA gene Rho GTPase activating protein 27, opposite strand 2
Cpgi3967 11 103360018 to 103361445 1427 CpG island CpG island 3967
Cpgi3968 11 103362353 to 103363680 1327 CpG island CpG island 3968
Arhgap27os1 11 103363213 to 103364651 1438 + antisense lncRNA gene Rho GTPase activating protein 27, opposite strand 1
Tssr111180 11 103363341 to 103363406 65 - TSS region transcription start site region 111180
Tssr111181 11 103363431 to 103363458 27 - TSS region transcription start site region 111181
Tssr111182 11 103363628 to 103363639 11 - TSS region transcription start site region 111182
Tssr3690 11 103363644 to 103363659 15 - TSS region transcription start site region 3690
Tssr111183 11 103363671 to 103363685 14 - TSS region transcription start site region 111183
Plekhm1 11 103365092 to 103412664 47572 - protein coding gene pleckstrin homology domain containing, family M (with RUN domain) member 1
Tssr111184 11 103374051 to 103374063 12 - TSS region transcription start site region 111184
Tssr111185 11 103374084 to 103374100 16 - TSS region transcription start site region 111185
Tssr111186 11 103374104 to 103374120 16 - TSS region transcription start site region 111186
Tssr111187 11 103375962 to 103375969 7 - TSS region transcription start site region 111187
D11Mit360 11 103383166 to 103383289 123 DNA segment DNA Segment, Chr 11 Massachusetts Institute of Technology 360
Cia40 11 103383166 to 115130618 11747452 QTL collagen induced arthritis QTL 40
Motr1 11 103383289 to 87800372 -15582917 QTL modifier of tubby retinal degeneration 1