Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:103262025-103362269

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Map3k14 11 103219764 to 103267401 47637 - protein coding gene mitogen-activated protein kinase kinase kinase 14
Tssr3689 11 103262395 to 103262420 25 - TSS region transcription start site region 3689
Cpgi3961 11 103264449 to 103264760 311 CpG island CpG island 3961
1700028N14Rik 11 103264860 to 103267745 2885 - unclassified non-coding RNA gene RIKEN cDNA 1700028N14 gene
Tssr111170 11 103265290 to 103265297 7 - TSS region transcription start site region 111170
Tssr105336 11 103266198 to 103266204 6 + TSS region transcription start site region 105336
Cpgi3962 11 103266836 to 103267960 1124 CpG island CpG island 3962
Tssr111171 11 103267351 to 103267362 11 - TSS region transcription start site region 111171
Tssr111172 11 103267364 to 103267391 27 - TSS region transcription start site region 111172
Tssr111173 11 103267393 to 103267404 11 - TSS region transcription start site region 111173
Tssr111174 11 103267405 to 103267414 9 - TSS region transcription start site region 111174
Tssr105337 11 103299337 to 103299346 9 + TSS region transcription start site region 105337
Cpgi3963 11 103312025 to 103312269 244 CpG island CpG island 3963
Arhgap27 11 103331497 to 103363692 32195 - protein coding gene Rho GTPase activating protein 27
Cpgi3964 11 103332769 to 103334444 1675 CpG island CpG island 3964
Tssr111175 11 103335308 to 103335324 16 - TSS region transcription start site region 111175
Tssr111176 11 103335328 to 103335334 6 - TSS region transcription start site region 111176
Cpgi3965 11 103340140 to 103340476 336 CpG island CpG island 3965
Tssr111177 11 103344651 to 103344719 68 - TSS region transcription start site region 111177
Tssr105338 11 103344731 to 103344759 28 + TSS region transcription start site region 105338
Arhgap27os3 11 103344753 to 103350124 5371 + antisense lncRNA gene Rho GTPase activating protein 27, opposite strand 3
Tssr105339 11 103344765 to 103344812 47 + TSS region transcription start site region 105339
Tssr105340 11 103347164 to 103347195 31 + TSS region transcription start site region 105340
Tssr105341 11 103355694 to 103355707 13 + TSS region transcription start site region 105341
Arhgap27os2 11 103355701 to 103361092 5391 + antisense lncRNA gene Rho GTPase activating protein 27, opposite strand 2
Tssr111178 11 103356324 to 103356385 61 - TSS region transcription start site region 111178
Cpgi3966 11 103359077 to 103359538 461 CpG island CpG island 3966
Cpgi3967 11 103360018 to 103361445 1427 CpG island CpG island 3967
Tssr111179 11 103360364 to 103360402 38 - TSS region transcription start site region 111179
Tssr105342 11 103360467 to 103360512 45 + TSS region transcription start site region 105342