Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:101385615-101465642

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58 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr3677 11 101396181 to 101396195 14 + TSS region transcription start site region 3677
Gm25475 11 101397589 to 101397768 179 - snRNA gene predicted gene, 25475
Gm27029 11 101406664 to 101424796 18132 - protein coding gene predicted gene, 27029
Aarsd1 11 101406665 to 101417433 10768 - protein coding gene alanyl-tRNA synthetase domain containing 1
Cpgi3869 11 101416989 to 101417641 652 CpG island CpG island 3869
Tssr110924 11 101417392 to 101417407 15 - TSS region transcription start site region 110924
Tssr110925 11 101417415 to 101417427 12 - TSS region transcription start site region 110925
Ptges3l 11 101418812 to 101425333 6521 - protein coding gene prostaglandin E synthase 3 like
Mir6929 11 101419187 to 101419253 66 - miRNA gene microRNA 6929
Tssr110926 11 101424630 to 101424675 45 - TSS region transcription start site region 110926
Cpgi3870 11 101424949 to 101425877 928 CpG island CpG island 3870
Tssr105108 11 101425068 to 101425114 46 + TSS region transcription start site region 105108
Rundc1 11 101425085 to 101435666 10581 + protein coding gene RUN domain containing 1
Tssr110927 11 101425330 to 101425388 58 - TSS region transcription start site region 110927
Tssr110928 11 101425615 to 101425642 27 - TSS region transcription start site region 110928
Cpgi3871 11 101442117 to 101442880 763 CpG island CpG island 3871
Tssr105109 11 101442289 to 101442294 5 + TSS region transcription start site region 105109
Rpl27 11 101442298 to 101445529 3231 + protein coding gene ribosomal protein L27
Tssr105110 11 101442367 to 101442378 11 + TSS region transcription start site region 105110
Tssr105111 11 101442379 to 101442395 16 + TSS region transcription start site region 105111
Tssr105112 11 101442401 to 101442410 9 + TSS region transcription start site region 105112
Tssr105113 11 101442412 to 101442439 27 + TSS region transcription start site region 105113
Tssr105114 11 101442440 to 101442468 28 + TSS region transcription start site region 105114
Tssr105115 11 101442480 to 101442494 14 + TSS region transcription start site region 105115
Tssr105116 11 101442522 to 101442531 9 + TSS region transcription start site region 105116
Tssr105117 11 101442677 to 101442684 7 + TSS region transcription start site region 105117
Tssr105118 11 101442693 to 101442718 25 + TSS region transcription start site region 105118
Tssr105119 11 101448403 to 101448487 84 + TSS region transcription start site region 105119
Ifi35 11 101448412 to 101458701 10289 + protein coding gene interferon-induced protein 35
Gm11626 11 101456576 to 101457390 814 - antisense lncRNA gene predicted gene 11626
Vat1 11 101458748 to 101466199 7451 - protein coding gene vesicle amine transport 1
Tssr110929 11 101459246 to 101459277 31 - TSS region transcription start site region 110929
Tssr110930 11 101459284 to 101459302 18 - TSS region transcription start site region 110930
Tssr110931 11 101459356 to 101459369 13 - TSS region transcription start site region 110931
Tssr110932 11 101459523 to 101459534 11 - TSS region transcription start site region 110932
Tssr110933 11 101459699 to 101459726 27 - TSS region transcription start site region 110933
Tssr105120 11 101459724 to 101459766 42 + TSS region transcription start site region 105120
Tssr110934 11 101459734 to 101459749 15 - TSS region transcription start site region 110934
Tssr110935 11 101459773 to 101459807 34 - TSS region transcription start site region 110935
Tssr110936 11 101459895 to 101459923 28 - TSS region transcription start site region 110936
Tssr110937 11 101459995 to 101460009 14 - TSS region transcription start site region 110937
Tssr105121 11 101460000 to 101460013 13 + TSS region transcription start site region 105121
Tssr105122 11 101460041 to 101460053 12 + TSS region transcription start site region 105122
Tssr105123 11 101460083 to 101460098 15 + TSS region transcription start site region 105123
Tssr110938 11 101460084 to 101460102 18 - TSS region transcription start site region 110938
Tssr105124 11 101460124 to 101460140 16 + TSS region transcription start site region 105124
Tssr105125 11 101460223 to 101460237 14 + TSS region transcription start site region 105125
Tssr110939 11 101460438 to 101460481 43 - TSS region transcription start site region 110939
Tssr110940 11 101460483 to 101460544 61 - TSS region transcription start site region 110940
Tssr110941 11 101462232 to 101462250 18 - TSS region transcription start site region 110941
Tssr110942 11 101462432 to 101462472 40 - TSS region transcription start site region 110942
Tssr110943 11 101462543 to 101462561 18 - TSS region transcription start site region 110943
Tssr110944 11 101462709 to 101462732 23 - TSS region transcription start site region 110944
Tssr110945 11 101462734 to 101462750 16 - TSS region transcription start site region 110945
Cpgi3872 11 101464984 to 101466427 1443 CpG island CpG island 3872
Tssr110946 11 101465190 to 101465222 32 - TSS region transcription start site region 110946
Tssr105126 11 101465302 to 101465317 15 + TSS region transcription start site region 105126
Tssr105127 11 101465478 to 101465499 21 + TSS region transcription start site region 105127