Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:100607543-100712455

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42 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Dnajc7 11 100582818 to 100620168 37350 - protein coding gene DnaJ heat shock protein family (Hsp40) member C7
Tssr110836 11 100610069 to 100610072 3 - TSS region transcription start site region 110836
Tssr110837 11 100613334 to 100613368 34 - TSS region transcription start site region 110837
Tssr110838 11 100613384 to 100613389 5 - TSS region transcription start site region 110838
Tssr110839 11 100613391 to 100613400 9 - TSS region transcription start site region 110839
Tssr110840 11 100613402 to 100613407 5 - TSS region transcription start site region 110840
Cpgi3821 11 100618887 to 100620092 1205 CpG island CpG island 3821
Tssr104951 11 100619217 to 100619283 66 + TSS region transcription start site region 104951
Tssr110841 11 100619593 to 100619596 3 - TSS region transcription start site region 110841
Tssr110842 11 100619598 to 100619657 59 - TSS region transcription start site region 110842
Tssr110843 11 100619674 to 100619685 11 - TSS region transcription start site region 110843
Tssr104952 11 100619729 to 100619760 31 + TSS region transcription start site region 104952
Nkiras2 11 100619856 to 100627610 7754 + protein coding gene NFKB inhibitor interacting Ras-like protein 2
Tssr110844 11 100620165 to 100620209 44 - TSS region transcription start site region 110844
Cpgi3822 11 100622692 to 100623290 598 CpG island CpG island 3822
Tssr3672 11 100622861 to 100622868 7 + TSS region transcription start site region 3672
Tssr104953 11 100622870 to 100622881 11 + TSS region transcription start site region 104953
Tssr104954 11 100622883 to 100622920 37 + TSS region transcription start site region 104954
Tssr104955 11 100622921 to 100622970 49 + TSS region transcription start site region 104955
Tssr104956 11 100622971 to 100622987 16 + TSS region transcription start site region 104956
Tssr104957 11 100624082 to 100624100 18 + TSS region transcription start site region 104957
Tssr104958 11 100626902 to 100626920 18 + TSS region transcription start site region 104958
Zfp385c 11 100627543 to 100692455 64912 - protein coding gene zinc finger protein 385C
Cpgi3823 11 100639932 to 100640901 969 CpG island CpG island 3823
Gm44544 11 100639944 to 100643117 3173 - pseudogene predicted gene 44544
Tssr110845 11 100650711 to 100650749 38 - TSS region transcription start site region 110845
Cpgi3824 11 100657328 to 100657544 216 CpG island CpG island 3824
Cpgi3825 11 100673145 to 100673410 265 CpG island CpG island 3825
Dhx58os 11 100687417 to 100697520 10103 + antisense lncRNA gene DEAH (Asp-Glu-Ala-His) box polypeptide 58, opposite strand
Gm38483 11 100689738 to 100697529 7791 + lncRNA gene predicted gene, 38483
Cpgi3826 11 100692155 to 100692316 161 CpG island CpG island 3826
Tssr110846 11 100692440 to 100692473 33 - TSS region transcription start site region 110846
Dhx58 11 100694884 to 100704271 9387 - protein coding gene DEXH (Asp-Glu-X-His) box polypeptide 58
Cpgi3827 11 100701229 to 100701437 208 CpG island CpG island 3827
Tssr110847 11 100701411 to 100701447 36 - TSS region transcription start site region 110847
Tssr110848 11 100703714 to 100703733 19 - TSS region transcription start site region 110848
Tssr110849 11 100704065 to 100704077 12 - TSS region transcription start site region 110849
Tssr110850 11 100704217 to 100704276 59 - TSS region transcription start site region 110850
Kat2a 11 100704746 to 100712465 7719 - protein coding gene K(lysine) acetyltransferase 2A
Cpgi3828 11 100711848 to 100712773 925 CpG island CpG island 3828
Tssr110851 11 100712346 to 100712355 9 - TSS region transcription start site region 110851
Tssr110852 11 100712429 to 100712476 47 - TSS region transcription start site region 110852