Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:89521263-89721275

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24 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Nr1h4 10 89454234 to 89533585 79351 - protein coding gene nuclear receptor subfamily 1, group H, member 4
Tssr98875 10 89533529 to 89533541 12 - TSS region transcription start site region 98875
Tssr98876 10 89533550 to 89533590 40 - TSS region transcription start site region 98876
Tssr98877 10 89533591 to 89533635 44 - TSS region transcription start site region 98877
Tssr98878 10 89548228 to 89548251 23 - TSS region transcription start site region 98878
Gm48087 10 89555083 to 89555719 636 - pseudogene predicted gene, 48087
Slc17a8 10 89574020 to 89621249 47229 - protein coding gene solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 8
Tssr98879 10 89592926 to 89592952 26 - TSS region transcription start site region 98879
Tssr98880 10 89600692 to 89600719 27 - TSS region transcription start site region 98880
Tssr98881 10 89621219 to 89621237 18 - TSS region transcription start site region 98881
Tssr98882 10 89621263 to 89621275 12 - TSS region transcription start site region 98882
Tssr98883 10 89621279 to 89621290 11 - TSS region transcription start site region 98883
Tssr98884 10 89621429 to 89621464 35 - TSS region transcription start site region 98884
Tssr98885 10 89632008 to 89632019 11 - TSS region transcription start site region 98885
Scyl2 10 89638721 to 89686285 47564 - protein coding gene SCY1-like 2 (S. cerevisiae)
Tssr98886 10 89647023 to 89647035 12 - TSS region transcription start site region 98886
Tssr98887 10 89674190 to 89674195 5 - TSS region transcription start site region 98887
Cpgi2091 10 89685606 to 89686491 885 CpG island CpG island 2091
Tssr98888 10 89686197 to 89686214 17 - TSS region transcription start site region 98888
Tssr98889 10 89686219 to 89686244 25 - TSS region transcription start site region 98889
Tssr98890 10 89686250 to 89686306 56 - TSS region transcription start site region 98890
Tssr95178 10 89686365 to 89686421 56 + TSS region transcription start site region 95178
1500026H17Rik 10 89686371 to 89700866 14495 + bidirectional promoter lncRNA gene RIKEN cDNA 1500026H17 gene
Actr6 10 89711971 to 89732295 20324 - protein coding gene ARP6 actin-related protein 6