Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:80936985-81137538

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87 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi1927 10 80936315 to 80936996 681 CpG island CpG island 1927
Cpgi1928 10 80939647 to 80940100 453 CpG island CpG island 1928
Tssr98533 10 80939703 to 80939708 5 - TSS region transcription start site region 98533
Tssr98534 10 80939804 to 80939809 5 - TSS region transcription start site region 98534
Tssr94658 10 80940076 to 80940096 20 + TSS region transcription start site region 94658
Tssr94659 10 80940215 to 80940226 11 + TSS region transcription start site region 94659
Tssr94660 10 80940239 to 80940243 4 + TSS region transcription start site region 94660
Tssr94661 10 80940264 to 80940269 5 + TSS region transcription start site region 94661
Tssr94662 10 80940638 to 80940659 21 + TSS region transcription start site region 94662
Tssr98535 10 80941898 to 80941906 8 - TSS region transcription start site region 98535
Gng7 10 80948624 to 81014925 66301 - protein coding gene guanine nucleotide binding protein (G protein), gamma 7
Cpgi1929 10 80952766 to 80953011 245 CpG island CpG island 1929
Gm3828 10 80954454 to 80954710 256 - pseudogene predicted gene 3828
Tssr98536 10 80954718 to 80954739 21 - TSS region transcription start site region 98536
Tssr98537 10 80957829 to 80957848 19 - TSS region transcription start site region 98537
Cpgi1930 10 80985355 to 80986048 693 CpG island CpG island 1930
Cpgi1931 10 80997956 to 80998278 322 CpG island CpG island 1931
Tssr98538 10 80998121 to 80998132 11 - TSS region transcription start site region 98538
Tssr98539 10 80998146 to 80998163 17 - TSS region transcription start site region 98539
Tssr98540 10 80998174 to 80998192 18 - TSS region transcription start site region 98540
Cpgi1932 10 80999465 to 81000111 646 CpG island CpG island 1932
Tssr94663 10 81000716 to 81000721 5 + TSS region transcription start site region 94663
Tssr98541 10 81001258 to 81001288 30 - TSS region transcription start site region 98541
Tssr98542 10 81001338 to 81001370 32 - TSS region transcription start site region 98542
Tssr94664 10 81010282 to 81010284 2 + TSS region transcription start site region 94664
Cpgi1933 10 81014796 to 81015115 319 CpG island CpG island 1933
Tssr98543 10 81014878 to 81014901 23 - TSS region transcription start site region 98543
Tssr98544 10 81014902 to 81014937 35 - TSS region transcription start site region 98544
Diras1 10 81019589 to 81025662 6073 - protein coding gene DIRAS family, GTP-binding RAS-like 1
Cpgi1934 10 81021693 to 81022627 934 CpG island CpG island 1934
Cpgi1935 10 81024768 to 81025721 953 CpG island CpG island 1935
Gm16099 10 81024811 to 81026567 1756 + antisense lncRNA gene predicted gene 16099
Tssr98545 10 81025363 to 81025402 39 - TSS region transcription start site region 98545
Tssr98546 10 81025406 to 81025411 5 - TSS region transcription start site region 98546
Tssr98547 10 81025521 to 81025559 38 - TSS region transcription start site region 98547
Tssr98548 10 81025804 to 81025821 17 - TSS region transcription start site region 98548
Tssr98549 10 81026185 to 81026204 19 - TSS region transcription start site region 98549
Slc39a3 10 81028540 to 81037421 8881 - protein coding gene solute carrier family 39 (zinc transporter), member 3
Cpgi1936 10 81036985 to 81037538 553 CpG island CpG island 1936
Tssr98550 10 81037258 to 81037295 37 - TSS region transcription start site region 98550
Tssr98551 10 81037300 to 81037339 39 - TSS region transcription start site region 98551
Sgta 10 81044075 to 81060181 16106 - protein coding gene small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha
Tssr98552 10 81050995 to 81050999 4 - TSS region transcription start site region 98552
Tssr3281 10 81057523 to 81057527 4 + TSS region transcription start site region 3281
Cpgi1937 10 81059778 to 81060446 668 CpG island CpG island 1937
Tssr98553 10 81060134 to 81060204 70 - TSS region transcription start site region 98553
Cpgi1938 10 81069609 to 81070540 931 CpG island CpG island 1938
Tssr94665 10 81070037 to 81070046 9 + TSS region transcription start site region 94665
Tssr94666 10 81070062 to 81070121 59 + TSS region transcription start site region 94666
Thop1 10 81070083 to 81082360 12277 + protein coding gene thimet oligopeptidase 1
Tssr94667 10 81070138 to 81070153 15 + TSS region transcription start site region 94667
Tssr94668 10 81070235 to 81070246 11 + TSS region transcription start site region 94668
Tssr94669 10 81075513 to 81075541 28 + TSS region transcription start site region 94669
Cpgi1939 10 81080029 to 81080638 609 CpG island CpG island 1939
Creb3l3 10 81084333 to 81098872 14539 - protein coding gene cAMP responsive element binding protein 3-like 3
Tssr98554 10 81089333 to 81089342 9 - TSS region transcription start site region 98554
Tssr98555 10 81092540 to 81092546 6 - TSS region transcription start site region 98555
Tssr98556 10 81092554 to 81092561 7 - TSS region transcription start site region 98556
Tssr98557 10 81092575 to 81092633 58 - TSS region transcription start site region 98557
Tssr98558 10 81092653 to 81092664 11 - TSS region transcription start site region 98558
D10Mit7 10 81098438 to 81098583 145 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 7
Tssr94670 10 81102683 to 81102688 5 + TSS region transcription start site region 94670
Mir5615-1 10 81104614 to 81104673 59 - miRNA gene microRNA 5615-1
Mir5615-2 10 81104616 to 81104675 59 + miRNA gene microRNA 5615-2
Cpgi1940 10 81105396 to 81106840 1444 CpG island CpG island 1940
Tssr98559 10 81105841 to 81105883 42 - TSS region transcription start site region 98559
Map2k2 10 81105912 to 81124697 18785 + protein coding gene mitogen-activated protein kinase kinase 2
Tssr94671 10 81105918 to 81105932 14 + TSS region transcription start site region 94671
Tssr94672 10 81105933 to 81106004 71 + TSS region transcription start site region 94672
Tssr94673 10 81118124 to 81118159 35 + TSS region transcription start site region 94673
Tssr94674 10 81120933 to 81120986 53 + TSS region transcription start site region 94674
Tssr94675 10 81123818 to 81123825 7 + TSS region transcription start site region 94675
Tssr94676 10 81128975 to 81128998 23 + TSS region transcription start site region 94676
Cpgi1941 10 81128995 to 81129693 698 CpG island CpG island 1941
Tssr98560 10 81129048 to 81129085 37 - TSS region transcription start site region 98560
Tssr98561 10 81129450 to 81129461 11 - TSS region transcription start site region 98561
Cpgi1942 10 81134213 to 81134486 273 CpG island CpG island 1942
Tssr98562 10 81134377 to 81134419 42 - TSS region transcription start site region 98562
Tssr94677 10 81134464 to 81134495 31 + TSS region transcription start site region 94677
Cpgi1943 10 81135151 to 81138771 3620 CpG island CpG island 1943
Zbtb7a 10 81135225 to 81152222 16997 + protein coding gene zinc finger and BTB domain containing 7a
Tssr94678 10 81135273 to 81135291 18 + TSS region transcription start site region 94678
Tssr94679 10 81135464 to 81135491 27 + TSS region transcription start site region 94679
Tssr94680 10 81136223 to 81136267 44 + TSS region transcription start site region 94680
Tssr94681 10 81136331 to 81136382 51 + TSS region transcription start site region 94681
Tssr94682 10 81136503 to 81136516 13 + TSS region transcription start site region 94682
Tssr94683 10 81136534 to 81136608 74 + TSS region transcription start site region 94683