Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:29226346-29626904

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
9330159F19Rik 10 29211606 to 29230779 19173 + protein coding gene RIKEN cDNA 9330159F19 gene
Gm40620 10 29287247 to 29290497 3250 - lncRNA gene predicted gene, 40620
Gm46218 10 29297934 to 29313825 15891 - antisense lncRNA gene predicted gene, 46218
Tssr92873 10 29310988 to 29310995 7 + TSS region transcription start site region 92873
Cpgi1413 10 29313122 to 29313694 572 CpG island CpG island 1413
Tssr92874 10 29313164 to 29313221 57 + TSS region transcription start site region 92874
Echdc1 10 29313166 to 29347469 34303 + protein coding gene enoyl Coenzyme A hydratase domain containing 1
Tssr92875 10 29313227 to 29313238 11 + TSS region transcription start site region 92875
Tssr97160 10 29313375 to 29313409 34 - TSS region transcription start site region 97160
Tssr92876 10 29313525 to 29313594 69 + TSS region transcription start site region 92876
Tssr92877 10 29313621 to 29313630 9 + TSS region transcription start site region 92877
Rnf146 10 29344176 to 29362442 18266 - protein coding gene ring finger protein 146
Gm25596 10 29349585 to 29349691 106 + snRNA gene predicted gene, 25596
Gm47483 10 29351879 to 29353893 2014 - unclassified gene predicted gene, 47483
Tssr3172 10 29357770 to 29357777 7 + TSS region transcription start site region 3172
Tssr97161 10 29361346 to 29361351 5 - TSS region transcription start site region 97161
Cpgi1414 10 29361391 to 29362475 1084 CpG island CpG island 1414
Gm30698 10 29361396 to 29362623 1227 + protein coding gene predicted gene, 30698
Tssr97162 10 29362012 to 29362029 17 - TSS region transcription start site region 97162
Tssr97163 10 29362032 to 29362075 43 - TSS region transcription start site region 97163
Gm40621 10 29367610 to 29375529 7919 + lincRNA gene predicted gene, 40621
Gm24286 10 29395036 to 29395163 127 + snoRNA gene predicted gene, 24286
Gm18903 10 29426346 to 29426904 558 + pseudogene predicted gene, 18903
Rspo3 10 29453106 to 29535867 82761 - protein coding gene R-spondin 3
Gm20276 10 29490774 to 29493421 2647 - unclassified gene predicted gene, 20276
Cpgi1415 10 29533529 to 29533733 204 CpG island CpG island 1415
Cpgi1416 10 29534476 to 29534773 297 CpG island CpG island 1416
Gm48159 10 29534717 to 29614471 79754 + antisense lncRNA gene predicted gene, 48159
Tssr92878 10 29535121 to 29535122 1 + TSS region transcription start site region 92878
Cpgi1417 10 29535422 to 29536139 717 CpG island CpG island 1417
Tssr97164 10 29535787 to 29535801 14 - TSS region transcription start site region 97164
Tssr97165 10 29535807 to 29535849 42 - TSS region transcription start site region 97165
Tssr97166 10 29535857 to 29535880 23 - TSS region transcription start site region 97166
Gm46197 10 29614161 to 29614576 415 - pseudogene predicted gene, 46197