Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:86357561-86418021

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18 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ncl 1 86344719 to 86359400 14681 - protein coding gene nucleolin
D1Mit516 1 86357856 to 86358108 252 DNA segment DNA Segment, Chr 1, Massachusetts Institute of Technology-516
Tssr12786 1 86358211 to 86358232 21 - TSS region transcription start site region 12786
Tssr12787 1 86358476 to 86358481 5 - TSS region transcription start site region 12787
Cpgi503 1 86358552 to 86360335 1783 CpG island CpG island 503
Tssr12788 1 86358970 to 86358997 27 - TSS region transcription start site region 12788
Tssr12789 1 86359018 to 86359046 28 - TSS region transcription start site region 12789
Tssr12790 1 86359358 to 86359381 23 - TSS region transcription start site region 12790
Tssr12791 1 86359481 to 86359486 5 - TSS region transcription start site region 12791
Tssr7749 1 86359553 to 86359590 37 + TSS region transcription start site region 7749
C130036L24Rik 1 86359574 to 86367964 8390 + lncRNA gene RIKEN cDNA C130036L24 gene
Tssr7750 1 86359638 to 86359692 54 + TSS region transcription start site region 7750
Tssr12792 1 86359951 to 86359966 15 - TSS region transcription start site region 12792
Gm45908 1 86377100 to 86378276 1176 - pseudogene predicted gene 45908
Nmur1 1 86386242 to 86389361 3119 - protein coding gene neuromedin U receptor 1
Cpgi504 1 86387561 to 86388021 460 CpG island CpG island 504
Tssr12793 1 86389369 to 86389429 60 - TSS region transcription start site region 12793
Tssr7751 1 86413928 to 86413969 41 + TSS region transcription start site region 7751