MPD: JaxKOMP-LAP measure: MPV

JaxKOMP-LAP phenotype measure: MPV

MPD and LIMS short name	MPV mean_platelet_volume_mpv
Phenotype description	mean platelet volume (MPV) [fL]
MPD and LIMS phenotype procedure	complete blood count hematology View protocol
MPD measure ID, data type	101292 numeric data
Number of genotypes	100 genotypes completed with analytics available, both sexes
Age at testing	75-81wks Late Adult Phenotyping study LAP

Ontology mappings

Data points below are the computed genotype effect size for each KOMP genotype vs. C57BL6/NJ controls.

MULTIPLE GENOTYPE PROFILE PLOT

Dimensions Width: × Height: px

Plot Options Alphabetical Order Standard Error Show Effect Sizes RankZ

Significance Threshold p-Value Threshold Adjusted Unadjusted

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Genotype	Genotype Effect	Genotype Effect SE	Genotype Effect RankZ	Adjusted p-value	Unadjusted p-value

1700001O22Rik^em1(IMPC)J -/-	-1.4693	0.28385	-2.0579	0.367	0.0354
Abhd17b^em1(IMPC)J -/-	-0.62393	0.43087	-1.6497	0.591	0.171
Acadsb^em1(IMPC)J -/-	0.16512	0.14311	0.68230	0.724	0.266
Acy1^em1(IMPC)J -/-	-0.28296	0.25483	-1.0866	0.724	0.289
Adad2^em1(IMPC)J -/-	-0.16191	0.16913	-0.50457	0.724	0.348
Adamts14^em1(IMPC)J -/-	-0.011536	0.24066	0.086973	0.981	0.966
Adamtsl4^em1(IMPC)J -/-	0.077981	0.28649	0.39469	0.940	0.789
Afmid^em1Llp -/-	0.14303	0.29003	0.56179	0.849	0.628
Agbl1^em1(IMPC)J/Mmjax -/-	-0.18460	0.15900	-0.65130	0.724	0.270
Ano8^em1(IMPC)J -/-	-0.17842	0.19987	-0.62092	0.724	0.385
Apmap^em1(IMPC)J/Mmjax -/-	0.11236	0.17856	0.47658	0.778	0.537
Arap3^em1(IMPC)J -/-	-0.016721	0.18048	0.037236	0.956	0.927
AU040320^em1(IMPC)J -/-	0.064459	0.18343	0.28940	0.937	0.730
Brip1^em1(IMPC)J/Mmjax -/-	0.41263	0.40104	1.5598	0.724	0.322
Catsperz^{tm1.1(KOMP)Vlcg} -/-	0.53756	0.12888	1.8852	0.0432	0.000432
Ccdc28a^{tm3b(EUCOMM)Wtsi}/2J -/-	-0.26616	0.14195	-1.0010	0.490	0.0735
Cdc42bpb^em1(IMPC)J -/+	-0.31535	0.37825	-1.2323	0.724	0.418
Cep135^em1(IMPC)J -/+	0.81490	0.42341	2.3301	0.724	0.305
Cgref1^em1(IMPC)J/Mmjax -/-	0.075757	0.13028	0.34157	0.800	0.568
Cldn13^em1(IMPC)J -/-	0.15547	0.15569	0.65130	0.724	0.333
Clptm1l^em1(IMPC)J/Mmjax -/-	0.40040	0.18273	1.4104	0.367	0.0446
Cr2^em1Llp -/-	-0.043952	0.20028	-0.11191	0.950	0.829
Diaph3^{tm1b(KOMP)Mbp}/2J -/+	0.30420	0.35557	1.0428	0.724	0.404
Dnajb2^em1(IMPC)J -/-	-0.17635	0.25007	-0.59110	0.760	0.491
Dnase1l2^em1(IMPC)J -/-	0.074895	0.11177	0.31538	0.760	0.509
Dusp18^em1(IMPC)J/Mmjax -/-	0.41522	0.49167	1.6497	0.755	0.460
Egfem1^em1(IMPC)J -/-	0.12626	0.71910	0.50457	0.950	0.877
Fbxo10^em1(IMPC)J/Mmjax -/-	-0.57077	0.23862	-1.5598	0.367	0.0313
Fkbp6^{tm1b(KOMP)Wtsi} -/-	-0.22482	0.22886	-0.77957	0.724	0.338
Frmpd1^em1(IMPC)J -/-	-2.1406	0.31866	-2.3301	0.164	0.00673
Gm20498^em1(IMPC)J/Mmjax -/-	0.15539	0.13477	0.62092	0.724	0.266
Gpr15^em1(IMPC)J -/-	0.15519	0.12985	0.59110	0.724	0.248
Gramd1c^{tm1b(KOMP)Wtsi} -/-	0.019349	0.098720	0.16202	0.950	0.847
Gramd3^em1(IMPC)J/Mmjax -/-	0.29385	0.33004	1.0866	0.724	0.383
Gsto1^em1(IMPC)J/Mmjax -/-	0.58537	0.20890	2.0579	0.367	0.0487
Gtpbp10^{tm1b(KOMP)Mbp} -/-	0.43846	0.15199	1.7553	0.164	0.00986
Hipk4^{tm1b(KOMP)Mbp} -/-	0.31707	0.41198	1.1325	0.755	0.453
Igsf11^{tm1b(KOMP)Wtsi} -/-	0.094196	0.13879	0.44895	0.760	0.506
Kcnc3^em1(IMPC)J -/-	0.32621	0.14486	1.1809	0.585	0.153
Klhl22^em1(IMPC)J/Mmjax -/-	-0.23785	0.13625	-0.84872	0.558	0.0970
Krt80^em1(IMPC)J -/-	-0.14737	0.19387	-0.44895	0.755	0.458
Kynu^em1(IMPC)J/Mmjax -/-	0.38728	0.38926	1.2872	0.724	0.393
Lpgat1^em1(IMPC)J/Mmjax -/-	-0.016216	0.14658	0.062085	0.951	0.913
Mapk15^{tm1b(EUCOMM)Hmgu} -/-	0.12708	0.15021	0.53296	0.724	0.409
Mfsd4b4^em1(IMPC)J/Mmjax -/-	-0.063049	0.17520	-0.18722	0.937	0.722
Mlx^{tm1.1(KOMP)Vlcg} -/-	-0.17482	0.21265	-0.56179	0.724	0.420
Mmaa^em1(IMPC)J/Mmjax -/-	0.034375	0.18490	0.21254	0.950	0.856
Nt5dc1^em1(IMPC)J -/-	0.080390	0.14237	0.42167	0.806	0.580
Nt5dc2^em1(IMPC)J/Mmjax -/-	-0.20865	0.13282	-0.71397	0.585	0.134
Otogl^em1(IMPC)J -/-	-0.31599	0.37546	-1.2872	0.724	0.413
Ovch2^{tm1b(KOMP)Mbp} -/-	0.077181	0.32322	0.36800	0.950	0.815
Pacrg^em1(IMPC)J -/-	-0.83160	0.25670	-1.8852	0.164	0.00709
Patj^em1(IMPC)J -/-	0.40393	0.17386	1.4810	0.367	0.0425
Pcgf1^{tm1.1(KOMP)Vlcg} -/+	-0.20661	0.15159	-0.92218	0.558	0.192
Plod2^em1(IMPC)J/Mmjax -/+	-0.14400	0.15053	-0.39469	0.724	0.354
Ptprk^em1(IMPC)J/Mmjax -/-	0.040577	0.32369	0.23800	0.950	0.902
Pus1^em1(IMPC)J/Mmjax -/-	-0.12683	0.19697	-0.36800	0.776	0.528
Rab34^{tm1b(EUCOMM)Hmgu} -/+	-0.066087	0.23783	-0.21254	0.940	0.785
Rad21l^{tm1b(KOMP)Wtsi} -/-	-0.31514	0.19030	-1.1809	0.558	0.117
Rbpms2^em1(IMPC)J -/-	-0.63696	0.23610	-1.7553	0.367	0.0272
Rec8^{tm1b(KOMP)Wtsi}/2J -/-	-0.044739	0.13512	-0.13693	0.937	0.744
Rgs22^{tm1b(KOMP)Wtsi} -/-	-0.24539	0.32624	-0.96084	0.757	0.469
Rimklb^{tm1.1(KOMP)Vlcg} -/-	-0.10703	0.15702	-0.23800	0.760	0.504
Rnf10^em1(IMPC)J -/-	-0.026199	0.19135	-0.012409	0.950	0.893
Rtl10^em1(IMPC)J/Mmjax -/-	0.28396	0.22141	1.0010	0.678	0.219
Rxylt1^em1(IMPC)J/Mmjax -/+	-0.35319	0.22730	-1.4104	0.585	0.144
Sebox^em1(IMPC)J -/-	0.063490	0.36787	0.26361	0.950	0.865
Secisbp2l^em1(IMPC)J/Mmjax -/-	0.38072	0.26288	1.2323	0.585	0.164
Setd6^{tm1.1(KOMP)Mbp}/3J -/-	-0.033880	0.12460	-0.037236	0.940	0.789
Sh3rf3^em1(IMPC)J/Mmjax -/-	-0.023548	0.15042	0.012409	0.950	0.877
Slc41a2^em1(IMPC)J/Mmjax -/-	0.27375	0.15874	0.92218	0.558	0.104
Snx3^{tm1.1(KOMP)Vlcg} -/+	-0.042531	0.14684	-0.086973	0.940	0.775
Sp5^{tm1b(KOMP)Wtsi} -/-	-0.21866	0.12894	-0.74637	0.558	0.114
Spag17^{tm1b(KOMP)Wtsi} -/-	-0.16574	0.11360	-0.53296	0.585	0.162
Spink12^em1(IMPC)J -/-	-0.27612	0.098519	-1.0428	0.164	0.00987
Stag3^{tm1e.1(KOMP)Wtsi}/2J -/-	-0.053608	0.16599	-0.16202	0.937	0.750
Svep1^{tm1b(EUCOMM)Hmgu} -/+	-0.15714	0.22678	-0.47658	0.760	0.496
Syce1^{tm1b(KOMP)Wtsi}/2J -/-	-0.12623	0.37589	-0.34157	0.937	0.740
Taco1^em1(IMPC)J/Mmjax -/+	-0.19978	0.12859	-0.68230	0.597	0.181
Taco1^em1(IMPC)J/Mmjax -/-	-0.15931	0.20381	-0.28940	0.849	0.441
Tat^em1(IMPC)J/Mmjax -/-	-0.040942	0.23871	-0.062085	0.950	0.866
Tbc1d5^em1(IMPC)J -/-	0.27495	0.14264	0.96084	0.501	0.0801
Tecpr2^em1(IMPC)J/Mmjax -/-	0.24785	0.24626	0.81366	0.724	0.334
Tex2^{tm1.1(KOMP)Vlcg}/2J -/-	-0.0093397	0.25223	0.11191	0.981	0.971
Thsd7a^{tm1b(KOMP)Mbp} -/-	-0.28956	0.13864	-1.1325	0.367	0.0512
Tnnc1^em1(IMPC)J/Mmjax -/+	0.028750	0.21038	0.18722	0.950	0.893
Tpgs2^{tm1.1(KOMP)Vlcg} -/-	-0.11130	0.23281	-0.31538	0.870	0.638
Trf^em1(IMPC)J/Mmjax -/+	0.40010	0.26347	1.3463	0.585	0.153
Trip13^{tm1.1(KOMP)Vlcg} -/-	-0.23739	0.22424	-0.81366	0.724	0.303
Tspan13^em1Llp -/-	0.17015	0.20301	0.71397	0.724	0.415
Ttc38^em1Llp -/-	-0.24254	0.39928	-0.88485	0.800	0.563
Tuba8^em1(IMPC)J -/-	0.25356	0.22340	0.84872	0.724	0.277
Ubap2^em1(IMPC)J/Mmjax -/-	-0.14573	0.11590	-0.42167	0.678	0.224
Wdr81^em1(IMPC)J -/+	-0.0052488	0.58942	0.13693	0.993	0.993
Yeats2^em1(IMPC)J/Mmjax -/+	0.25576	0.12343	0.88485	0.367	0.0514
Zc3h7a^em1(IMPC)J/Mmjax -/-	-0.32445	0.23683	-1.3463	0.597	0.185
Zfp174^em1(IMPC)J -/-	-0.10752	0.12609	-0.26361	0.724	0.405
Zfp329^em1(IMPC)J -/-	-0.44309	0.12497	-1.4810	0.108	0.00216
Zfp422^em1(IMPC)J -/-	0.18412	0.11995	0.74637	0.585	0.140
Zfp706^em1(IMPC)J/Mmjax -/+	0.21540	0.22661	0.77957	0.724	0.357

TRAIT CORRELATION PLOT

Correlate mean platelet volume (MPV) with JaxKOMP-LAP trait: