MPD: JaxKOMP-EAP genotype: Rexo1<sup>em1(IMPC)J</sup>/Mmjax -/+

JaxKOMP-EAP effect sizes: Rexo1^em1(IMPC)J/Mmjax -/+ Gene Rexo1

MULTIPLE (NUMERIC) TRAIT PROFILE PLOT — Early Adult Phenotyping study (EAP)

Procedure	JaxKOMP-EAP Trait	Trait Effect	Trait Effect SE	Trait Effect RankZ	Adjusted p-value	Unadjusted p-value
ABR test	auditory brainstem response (ABR) threshold, sound pressure level, 6 kHz pip	0.77508	6.5220	-0.034581	0.975	0.916
ABR test	auditory brainstem response (ABR) threshold, sound pressure level, 12 kHz pip	-7.3687	3.5443	-1.3556	0.660	0.173
ABR test	auditory brainstem response (ABR) threshold, sound pressure level, 18 kHz pip	-3.4152	6.6997	-0.88912	0.883	0.661
ABR test	auditory brainstem response (ABR) threshold, sound pressure level, 24 kHz pip	-3.2201	7.5959	-0.62795	0.895	0.713
ABR test	auditory brainstem response (ABR) threshold, sound pressure level, 30 kHz pip	-2.0455	4.2357	-0.35649	0.873	0.677
body composition	body length	-0.0045773	0.043214	0.13293	0.979	0.916
body composition	body weight (at time of DXA)	-0.94162	0.51169	-0.59805	0.221	0.0753
body composition	bone area, whole body scan, head excluded	0.016638	0.13478	0.24265	0.962	0.903
body composition	bone mineral content of whole body scan, head excluded	0.0063932	0.010753	0.50228	0.779	0.557
body composition	bone mineral content to body weight ratio	0.00016293	0.00046644	0.37446	0.869	0.729
body composition	bone mineral density of whole body scan, head excluded	0.00025052	0.00066177	0.29020	0.866	0.708
body composition	fat tissue mass of whole body scan, head excluded	0.016311	0.48740	0.020480	0.986	0.974
body composition	fat tissue mass to body weight ratio	0.00048951	0.016893	0.091601	0.996	0.977
body composition	lean tissue mass of whole body scan, head excluded	0.18302	0.44140	0.22721	0.872	0.681
body composition	lean tissue mass to body weight ratio	0.0062034	0.016536	0.27740	0.860	0.710
body composition	percent fat, whole body scan, head excluded	-0.058417	1.5160	0.045069	0.985	0.970
body composition	ratio of soft-tissue attenuation coefficients	0.0000040855	0.0016468	-0.067094	0.999	0.998
body composition	tissue area	-0.13812	0.28360	-0.28111	0.856	0.630
body composition	total tissue mass, whole body scan, head excluded	0.21404	0.31142	0.25391	0.717	0.497
clinical blood chemistry	alanine transaminase (plasma ALT)	-5.6545	3.5026	-0.52880	0.483	0.120
clinical blood chemistry	albumin (plasma Alb)	-0.23504	0.43756	-0.29808	0.842	0.596
clinical blood chemistry	alkaline phosphatase (plasma ALP)	-1.8869	4.9049	-0.85953	0.849	0.704
clinical blood chemistry	aspartate transaminase (plasma AST)	-6.7559	6.3316	-0.34561	0.617	0.297
clinical blood chemistry	aspartate transaminase to alanine transaminase ratio (plasma AST:ALT)	0.064954	0.085435	0.22618	0.805	0.454
clinical blood chemistry	blood urea nitrogen (BUN)	-0.041667	2.1425	-0.055205	0.993	0.985
clinical blood chemistry	calcium (plasma Ca)	-0.029011	0.057601	0.14482	0.787	0.619
clinical blood chemistry	creatinine (plasma)	-0.0027482	0.012578	0.043936	0.910	0.829
clinical blood chemistry	glucose (plasma GLU, no fast)	13.917	12.597	0.82344	0.487	0.280
clinical blood chemistry	HDL cholesterol (plasma HDL)	6.6774	3.1744	1.1872	0.231	0.0466
clinical blood chemistry	HDL cholesterol to total cholesterol ratio	0.015792	0.0078274	0.73703	0.306	0.0550
clinical blood chemistry	phosphorus (plasma phosphate)	0.51495	0.27462	0.71577	0.276	0.0735
clinical blood chemistry	total bilirubin (plasma TBIL)	-0.0062500	0.0039131	-0.48858	0.415	0.123
clinical blood chemistry	total cholesterol (plasma CHOL, no fast)	4.3483	4.5135	0.52750	0.651	0.345
clinical blood chemistry	total protein (plasma TP)	0.84887	0.50428	0.57386	0.374	0.106
clinical blood chemistry	triglyceride (plasma TG, no fast)	-118.00	36.117	-2.6525	0.0540	0.00326
ERG v2.0	left eye a-wave amplitude (Photopic)	1.2768	1.5467	0.41870	0.727	0.425
ERG v2.0	left eye a-wave amplitude (Scotopic)	17.574	16.933	0.42871	0.691	0.318
ERG v2.0	left eye a-wave implicit timing (Photopic)	0.26316	2.1122	0.33389	0.990	0.903
ERG v2.0	left eye a-wave implicit timing (Scotopic)	0.23750	0.47777	0.26699	0.864	0.628
ERG v2.0	left eye b-wave amplitude (Photopic)	0.20741	3.2558	-0.17124	0.978	0.950
ERG v2.0	left eye b-wave amplitude (Scotopic)	-21.270	33.968	-0.20246	0.842	0.543
ERG v2.0	left eye b-wave implicit timing (Photopic)	-0.17130	1.5140	0.13231	0.976	0.912
ERG v2.0	left eye b-wave implicit timing (Scotopic)	-0.27698	3.4970	0.0082637	0.984	0.938
ERG v2.0	left eye c-wave amplitude (Scotopic)	-33.106	26.747	-0.35940	0.653	0.238
ERG v2.0	left eye c-wave implicit timing (Scotopic)	-27.131	54.541	-0.34186	0.916	0.627
ERG v2.0	left eye FO-like wave amplitude (Scotopic)	47.580	33.258	0.43677	0.588	0.178
ERG v2.0	left eye FO-like wave implicit timing (Scotopic)	82.964	180.47	0.46524	0.895	0.653
ERG v2.0	right eye a-wave amplitude (Photopic)	-2.0574	1.6463	-0.64714	0.705	0.233
ERG v2.0	right eye a-wave amplitude (Scotopic)	-4.2828	21.778	-0.46721	0.961	0.847
ERG v2.0	right eye a-wave implicit timing (Photopic)	0.92690	1.8489	0.47755	0.939	0.625
ERG v2.0	right eye a-wave implicit timing (Scotopic)	0.89474	0.38848	0.75652	0.371	0.0384
ERG v2.0	right eye b-wave amplitude (Photopic)	0.97037	4.0682	-0.13231	0.956	0.815
ERG v2.0	right eye b-wave amplitude (Scotopic)	22.608	49.974	0.61361	0.933	0.658
ERG v2.0	right eye b-wave implicit timing (Photopic)	0.064105	2.0162	0.19360	0.983	0.975
ERG v2.0	right eye b-wave implicit timing (Scotopic)	-2.8918	4.4412	-0.17682	0.864	0.526
ERG v2.0	right eye c-wave amplitude (Scotopic)	-10.877	22.643	0.099108	0.892	0.639
ERG v2.0	right eye c-wave implicit timing (Scotopic)	-31.442	31.057	-0.20246	0.751	0.330
ERG v2.0	right eye FO-like wave amplitude (Scotopic)	-0.19920	35.003	-0.22732	0.997	0.996
ERG v2.0	right eye FO-like wave implicit timing (Scotopic)	217.79	189.71	0.92443	0.801	0.272
glucose tolerance test	amount glucose injected	-2.9491	4.0031	-0.48674	0.785	0.468
glucose tolerance test	plasma glucose, 0min	3.9674	4.5593	0.17663	0.618	0.392
glucose tolerance test	plasma glucose, 15min	-19.162	23.544	-0.41073	0.729	0.423
glucose tolerance test	plasma glucose, 30min	5.7043	18.814	0.30675	0.907	0.764
glucose tolerance test	plasma glucose, 60min	22.829	14.634	1.0176	0.421	0.130
glucose tolerance test	plasma glucose, 120min	18.240	6.8520	1.0844	0.142	0.0127
grip strength	body weight (at time of grip strength test)	0.064000	0.41475	0.27468	0.950	0.903
grip strength	forelimb and hindlimb grip strength (mean of trials), average	12.780	12.655	1.1870	0.692	0.497
grip strength	forelimb and hindlimb grip strength (mean of trials), average normalized to bw	0.71555	0.31329	1.2261	0.475	0.263
grip strength	forelimb and hindlimb grip strength by trial, trial1	14.275	9.5744	1.2200	0.670	0.376
grip strength	forelimb and hindlimb grip strength by trial, trial2	5.9735	13.131	0.63047	0.871	0.728
grip strength	forelimb and hindlimb grip strength by trial, trial3	13.834	18.524	1.1165	0.799	0.592
grip strength	forelimb grip strength (mean of trials), average	6.6225	4.9265	1.1468	0.661	0.407
grip strength	forelimb grip strength (mean of trials), average normalized to bw	0.40645	0.21843	1.1988	0.590	0.314
grip strength	forelimb grip strength by trial, trial1	9.0190	6.3517	1.2935	0.709	0.391
grip strength	forelimb grip strength by trial, trial2	11.064	6.4288	1.4093	0.659	0.335
grip strength	forelimb grip strength by trial, trial3	-0.11148	6.4236	0.24795	0.994	0.989
heart weight	heart weight, normalized to body weight	0.096142	0.12124	-0.096767	0.639	0.434
heart weight	heart weight, weight	-1.2020	3.2515	-0.52363	0.834	0.714
hematology	basophil differential (percent of total WBC)	-0.042593	0.052755	-0.63117	0.793	0.427
hematology	eosinophil differential (percent of total WBC)	-0.10417	0.23606	-0.22128	0.889	0.663
hematology	hematocrit (HCT)	0.40625	0.53674	0.064282	0.700	0.456
hematology	lymphocyte differential (percent of total WBC)	2.1271	0.71450	0.74392	0.0775	0.00655
hematology	mean corpuscular hemoglobin (CHr)	-0.16910	0.072886	-1.3081	0.124	0.0292
hematology	mean platelet volume (MPV)	0.12480	0.035302	0.61661	0.0155	0.00177
hematology	mean RBC corpuscular hemoglobin concentration (MCHC)	-0.43171	0.18136	-0.80320	0.220	0.0256
hematology	mean RBC corpuscular volume (MCV)	0.061895	0.15442	0.14539	0.847	0.692
hematology	measured hemoglobin (mHGB)	-0.098751	0.18789	-0.49312	0.809	0.604
hematology	monocyte differential (percent of total WBC)	-0.36114	0.21242	-0.88285	0.443	0.102
hematology	neutrophil differential (percent of total WBC)	-1.6102	0.58045	-0.71362	0.0934	0.0105
hematology	platelet count (PLT; units per volume x 10³)	-44.812	60.831	-0.55954	0.764	0.468
hematology	RBC corpuscular distribution width (RDW)	-0.075281	0.21674	-0.25986	0.864	0.731
hematology	red blood cell count (RBC; per volume x 10⁶)	0.063259	0.12976	-0.064352	0.811	0.630
hematology	reticulocyte count (Retic; units per volume x 10⁹)	0.63750	16.351	0.12186	0.992	0.969
hematology	reticulocyte differential (percent of total RBC)	-0.010000	0.15065	0.16916	0.981	0.948
hematology	white blood cell count (WBC; units per volume x 10³)	-0.69773	0.93987	-0.31253	0.653	0.465
holeboard	number of hole pokes by individual hole number, 20 min test, 1	-1.5648	1.2980	-1.4806	0.708	0.237
holeboard	number of hole pokes by individual hole number, 20 min test, 2	-0.50000	0.69068	-0.66235	0.868	0.475
holeboard	number of hole pokes by individual hole number, 20 min test, 3	-0.26686	0.70335	-0.37036	0.937	0.707
holeboard	number of hole pokes by individual hole number, 20 min test, 4	1.2287	0.94284	1.2496	0.673	0.202
holeboard	number of hole pokes by individual hole number, 20 min test, 5	0.0037850	0.81471	0.11588	0.997	0.996
holeboard	number of hole pokes by individual hole number, 20 min test, 6	0.65442	0.41986	1.4091	0.727	0.129
holeboard	number of hole pokes by individual hole number, 20 min test, 7	0.21386	0.34478	0.57932	0.931	0.540
holeboard	number of hole pokes by individual hole number, 20 min test, 8	0.64383	0.70199	1.1590	0.807	0.366
holeboard	number of hole pokes by individual hole number, 20 min test, 9	0.75452	0.55844	1.2986	0.666	0.186
holeboard	number of hole pokes by individual hole number, 20 min test, 10	0.63253	0.28720	1.4745	0.582	0.0352
holeboard	number of hole pokes by individual hole number, 20 min test, 11	0.16642	0.45973	0.44312	0.943	0.720
holeboard	number of hole pokes by individual hole number, 20 min test, 12	0.84225	0.48143	1.2994	0.522	0.0901
holeboard	number of hole pokes by individual hole number, 20 min test, 13	-0.76675	1.0712	-0.66079	0.808	0.480
holeboard	number of hole pokes by individual hole number, 20 min test, 14	0.52184	0.75679	0.87132	0.845	0.496
holeboard	number of hole pokes by individual hole number, 20 min test, 15	0.15361	0.74412	0.30492	0.946	0.838
holeboard	number of hole pokes by individual hole number, 20 min test, 16	0.87610	0.88872	0.78342	0.730	0.332
holeboard	total number of hole pokes, 20 min test	3.6837	7.1081	0.60716	0.803	0.608
light / dark	latency to enter dark zone, 20 min test	99.488	62.058	1.5206	0.558	0.119
light / dark	number of transitions between light and dark zones, 20 min test	-18.473	5.3411	-1.7036	0.0431	0.00156
light / dark	percentage of total time in dark zone, 20 min test	-3.7016	6.1491	-0.54499	0.813	0.551
light / dark	percentage of total time in light zone, 20 min test	3.7011	6.1491	0.54186	0.811	0.551
light / dark	time mobile in dark zone, 20 min test	-10.481	6.2213	-0.76471	0.352	0.102
light / dark	time mobile in light zone, 20 min test	4.0817	5.7297	0.021634	0.724	0.482
light / dark	time spent in dark zone, 20 min test	-68.256	68.702	-0.81081	0.717	0.328
light / dark	time spent in light zone, 20 min test	68.256	68.702	0.81081	0.717	0.328
open field	average speed in center of arena, 20 min test	0.12963	0.54267	0.14348	0.941	0.813
open field	average speed in periphery of arena, 20 min test	-0.26565	0.28293	-1.4746	0.581	0.356
open field	distance traveled habituation ratio, 20 min test	4.8021	12.095	0.42239	0.879	0.694
open field	distance traveled in center of arena, 20 min test	-19.239	130.99	-0.50006	0.939	0.884
open field	distance traveled in periphery of arena, 20 min test	-187.83	305.98	-1.1751	0.748	0.544
open field	distance traveled slope, 20 min test	2.5102	11.462	0.30332	0.948	0.828
open field	distance traveled, 20 min test, 1st 5min	-82.634	108.73	-0.99164	0.691	0.454
open field	distance traveled, 20 min test, 2nd 5min	-13.862	89.939	-0.67238	0.944	0.879
open field	distance traveled, 20 min test, 3rd 5min	-69.010	114.63	-1.2106	0.764	0.552
open field	distance traveled, 20 min test, 4th 5min	-41.195	110.26	-0.94236	0.864	0.712
open field	number of clockwise revolution episodes, 20 min test	0.70227	3.8820	0.0040300	0.952	0.858
open field	number of counter-clockwise revolution episodes, 20 min test	-0.35522	1.9334	-0.61296	0.941	0.856
open field	number of rears in 5 min bins, 20 min test, 1st 5min	0.72494	2.8132	-0.017464	0.915	0.799
open field	number of rears in 5 min bins, 20 min test, 2nd 5min	3.5160	3.1076	0.55249	0.558	0.268
open field	number of rears in 5 min bins, 20 min test, 3rd 5min	2.0649	3.9115	0.17884	0.793	0.602
open field	number of rears in 5 min bins, 20 min test, 4th 5min	2.2080	3.1858	0.15977	0.728	0.494
open field	percentage of total time in center of arena, 20 min test	-0.046977	3.9703	-0.20483	0.998	0.991
open field	percentage of total time in center of arena, slope, 20 min test	-2.0834	2.6480	-0.96137	0.835	0.438
open field	percentage of total time in center, habituation ratio, 20 min test	-2.7634	2.7540	-1.2655	0.787	0.325
open field	percentage of total time in corners of arena, 20 min test	-0.83017	3.4475	0.15298	0.931	0.812
open field	percentage of total time in corners, habituation ratio, 20 min test	3.0471	1.7031	1.0412	0.538	0.0848
open field	percentage of total time in corners, slope, 20 min test	2.6167	1.6640	0.90129	0.626	0.127
open field	permanence time in center of arena, 20 min test	-0.56209	47.641	-0.20209	0.998	0.991
open field	permanence time in corners of arena, 20 min test	-9.9682	41.375	0.15298	0.931	0.811
open field	permanence time in periphery of arena, 20 min test	0.56445	47.642	0.20209	0.998	0.991
open field	total distance traveled, 20 min test	-205.27	380.96	-1.0909	0.771	0.594
open field	total number of rears, 20 min test	8.5917	10.922	0.26001	0.681	0.438
open field	whole arena average speed, 20 min test	-0.17032	0.31759	-1.0861	0.772	0.596
open field	whole arena resting time, 20 min test	47.181	33.597	1.8213	0.353	0.172
open field	whole arena time spent mobile, 20 min test	-9.0193	7.4631	-0.94655	0.438	0.237
open field	whole arena time spent vertical, 20 min test	8.8082	6.3607	0.56033	0.481	0.177
SHIRPA	locomotor activity (number of squares in the arena the mouse moves into with all four paws in first 30 s of test)	3.8603	2.0408	1.7051	0.614	0.310
startle / PPI	average baseline movement during background noise	-0.18617	1.4889	-0.059583	0.993	0.901
startle / PPI	average of each corrected maximum percent pre-pulse inhibition value	0.063015	0.078955	0.48888	0.754	0.432
startle / PPI	average of each corrected percent pre-pulse inhibition value	0.043831	0.080030	0.34848	0.833	0.588
startle / PPI	average percent pre-pulse inhibition to full pulse (120 dB) preceded by pre-pulse, 74dB sound pressure level	-3.9167	9.4322	-0.38102	0.952	0.681
startle / PPI	average percent pre-pulse inhibition to full pulse (120 dB) preceded by pre-pulse, 78dB sound pressure level	6.2715	8.0008	0.57112	0.741	0.440
startle / PPI	average percent pre-pulse inhibition to full pulse (120 dB) preceded by pre-pulse, 82dB sound pressure level	6.4052	7.1113	0.57112	0.677	0.376
startle / PPI	average startle response to full pulse (120 dB)	-4.7060	37.728	0.086277	0.967	0.902
startle / PPI	average startle response to full pulse (120 dB) preceded by pre-pulse, 74dB sound pressure level	7.9553	37.116	0.37801	0.926	0.832
startle / PPI	average startle response to full pulse (120 dB) preceded by pre-pulse, 78dB sound pressure level	-10.742	33.834	-0.041345	0.860	0.753
startle / PPI	average startle response to full pulse (120 dB) preceded by pre-pulse, 82dB sound pressure level	-10.830	32.399	-0.073626	0.853	0.741
startle / PPI	average startle response to pre-pulse, 74dB sound pressure level	1.1186	1.3393	0.76952	0.832	0.411
startle / PPI	average startle response to pre-pulse, 78dB sound pressure level	0.14867	2.1907	0.12150	0.991	0.946
startle / PPI	average startle response to pre-pulse, 82dB sound pressure level	2.0809	1.6513	0.72688	0.664	0.219
startle / PPI	corrected average percent pre-pulse inhibition to full pulse (120 dB) preceded by pre-pulse, 74dB sound pressure level	-0.027869	0.10544	-0.19672	0.970	0.794
startle / PPI	corrected average percent pre-pulse inhibition to full pulse (120 dB) preceded by pre-pulse, 78dB sound pressure level	0.076352	0.088785	0.56360	0.706	0.397
startle / PPI	corrected average percent pre-pulse inhibition to full pulse (120 dB) preceded by pre-pulse, 82dB sound pressure level	0.083012	0.082185	0.46951	0.588	0.321
startle / PPI	corrected average startle response to full pulse (120 dB) minus average baseline movement during background noise	-4.2697	37.389	0.11726	0.961	0.910
startle / PPI	corrected average startle response to pre-pulse and full pulse (120 dB) minus average startle response to same pre-pulse, 74dB sound pressure level	6.8367	37.125	0.34659	0.934	0.855
startle / PPI	corrected average startle response to pre-pulse and full pulse (120 dB) minus average startle response to same pre-pulse, 78dB sound pressure level	-10.979	33.821	-0.041345	0.858	0.748
startle / PPI	corrected average startle response to pre-pulse and full pulse (120 dB) minus average startle response to same pre-pulse, 82dB sound pressure level	-12.911	32.106	-0.12008	0.815	0.691
startle / PPI	corrected maximum percent pre-pulse inhibition to full pulse (120 dB) preceded by pre-pulse, 74dB sound pressure level	0.017839	0.10531	0.19958	0.976	0.867
startle / PPI	corrected maximum percent pre-pulse inhibition to full pulse (120 dB) preceded by pre-pulse, 78dB sound pressure level	0.089339	0.085787	0.62599	0.651	0.307
startle / PPI	corrected maximum percent pre-pulse inhibition to full pulse (120 dB) preceded by pre-pulse, 82dB sound pressure level	0.081868	0.081165	0.43535	0.587	0.322
startle / PPI	corrected maximum startle response to full pulse (120 dB) minus maximum baseline movement during background noise	-5.6749	144.44	0.16823	0.986	0.969
startle / PPI	corrected maximum startle response to pre-pulse and full pulse (120 dB) minus maximum startle response to same pre-pulse, 74dB sound pressure level	10.212	136.42	0.24554	0.971	0.941
startle / PPI	corrected maximum startle response to pre-pulse and full pulse (120 dB) minus maximum startle response to same pre-pulse, 78dB sound pressure level	-45.330	128.94	-0.063795	0.839	0.728
startle / PPI	corrected maximum startle response to pre-pulse and full pulse (120 dB) minus maximum startle response to same pre-pulse, 82dB sound pressure level	-43.421	119.54	-0.079247	0.831	0.719
startle / PPI	maximum baseline movement during background noise	-2.2945	3.2812	-0.62474	0.853	0.490
startle / PPI	maximum percent pre-pulse inhibition to full pulse (120 dB) preceded by pre-pulse, 74dB sound pressure level	0.16140	9.6045	0.056776	1.00	0.987
startle / PPI	maximum percent pre-pulse inhibition to full pulse (120 dB) preceded by pre-pulse, 78dB sound pressure level	7.9259	7.8658	0.65223	0.675	0.323
startle / PPI	maximum percent pre-pulse inhibition to full pulse (120 dB) preceded by pre-pulse, 82dB sound pressure level	6.9658	7.3106	0.51910	0.639	0.349
startle / PPI	maximum startle response to full pulse (120 dB)	-8.7346	145.50	0.14695	0.979	0.953
startle / PPI	maximum startle response to full pulse (120 dB) preceded by pre-pulse, 74dB sound pressure level	13.128	136.33	0.24988	0.958	0.924
startle / PPI	maximum startle response to full pulse (120 dB) preceded by pre-pulse, 78dB sound pressure level	-46.010	129.07	-0.076436	0.838	0.724
startle / PPI	maximum startle response to full pulse (120 dB) preceded by pre-pulse, 82dB sound pressure level	-38.484	120.58	-0.059583	0.860	0.752
startle / PPI	maximum startle response to pre-pulse, 74dB sound pressure level	2.9162	3.6608	0.87565	0.818	0.433
startle / PPI	maximum startle response to pre-pulse, 78dB sound pressure level	-0.68012	6.2044	-0.17961	0.991	0.914
startle / PPI	maximum startle response to pre-pulse, 82dB sound pressure level	4.9377	3.5652	0.66266	0.546	0.178

MULTIPLE (CATEGORICAL) TRAIT PROFILE PLOT — Early Adult Phenotyping study (EAP)

In this plot, data points are the computed genotype effect % vs. C57BL/6NJ controls, for all measured categorical phenotypes in JaxKOMP-EAP

Dimensions Width: × Height: px

Plot Options Group by Procedure

Include Sexes Data Both Females Males

Significance Threshold p-Value Threshold

Download Plot

Procedure	JaxKOMP-EAP Trait	Sex	Trait Effect	P-value

eye morphology	anterior chamber depth	females	1.0 %	1.0
eye morphology	anterior chamber depth	males	0.0 %	1.0
eye morphology	anterior chamber depth	both	1.0 %	1.0
eye morphology	bulging eye	females	1.0 %	1.0
eye morphology	bulging eye	males	0.0 %	1.0
eye morphology	bulging eye	both	1.0 %	1.00
eye morphology	cornea	females	4.0 %	1.0
eye morphology	cornea	males	2.0 %	1.0
eye morphology	cornea	both	3.0 %	1.00
eye morphology	cornea opacity	females	9.0 %	0.359
eye morphology	cornea opacity	males	12.0 %	0.111
eye morphology	cornea opacity	both	11.0 %	0.123
eye morphology	cornea vascularization	females	3.0 %	1.0
eye morphology	cornea vascularization	males	12.0 %	0.0271
eye morphology	cornea vascularization	both	6.0 %	0.234
eye morphology	corneal deposits	females	2.0 %	1.0
eye morphology	corneal deposits	males	1.0 %	1.0
eye morphology	corneal deposits	both	1.0 %	1.00
eye morphology	corneal mineralization	females	23.0 %	0.00569
eye morphology	corneal mineralization	males	1.0 %	1.0
eye morphology	corneal mineralization	both	11.0 %	0.00931
eye morphology	corneal scleralization	females	11.0 %	0.220
eye morphology	corneal scleralization	males	12.0 %	0.0947
eye morphology	corneal scleralization	both	12.0 %	0.0355
eye morphology	corneal ulcer	females	1.0 %	1.0
eye morphology	corneal ulcer	males	1.0 %	1.0
eye morphology	corneal ulcer	both	1.0 %	1.00
eye morphology	eye closure	females	1.0 %	1.00
eye morphology	eye closure	males	0.0 %	1.0
eye morphology	eye closure	both	1.0 %	1.0
eye morphology	eye hemorrhage or blood presence	females	2.0 %	1.00
eye morphology	eye hemorrhage or blood presence	males	1.0 %	1.0
eye morphology	eye hemorrhage or blood presence	both	1.0 %	1.00
eye morphology	eyelid morphology	females	1.0 %	1.0
eye morphology	eyelid morphology	males	0.0 %	1.0
eye morphology	eyelid morphology	both	1.0 %	1.0
eye morphology	eyes (present, absent)	females	1.0 %	1.0
eye morphology	eyes (present, absent)	males	0.0 %	1.0
eye morphology	eyes (present, absent)	both	0.0 %	1.0
eye morphology	fusion between cornea and lens	females	4.0 %	1.00
eye morphology	fusion between cornea and lens	males	2.0 %	1.0
eye morphology	fusion between cornea and lens	both	3.0 %	1.00
eye morphology	iris pigmentation	females	2.0 %	1.0
eye morphology	iris pigmentation	males	1.0 %	1.0
eye morphology	iris pigmentation	both	2.0 %	1.00
eye morphology	iris transillumination	females	2.0 %	1.00
eye morphology	iris transillumination	males	1.0 %	1.0
eye morphology	iris transillumination	both	1.0 %	1.00
eye morphology	irispupil	females	4.0 %	1.00
eye morphology	irispupil	males	3.0 %	1.0
eye morphology	irispupil	both	3.0 %	1.00
eye morphology	lacrimation	females	3.0 %	1.0
eye morphology	lacrimation	males	2.0 %	1.0
eye morphology	lacrimation	both	3.0 %	1.0
eye morphology	lens	females	10.0 %	1.00
eye morphology	lens	males	8.0 %	1.0
eye morphology	lens	both	9.0 %	1.0
eye morphology	lens opacity	females	9.0 %	1.0
eye morphology	lens opacity	males	6.0 %	1.0
eye morphology	lens opacity	both	7.0 %	1.00
eye morphology	narrow eye opening	females	2.0 %	1.0
eye morphology	narrow eye opening	males	1.0 %	1.0
eye morphology	narrow eye opening	both	1.0 %	1.0
eye morphology	optic disc	females	4.0 %	1.00
eye morphology	optic disc	males	2.0 %	1.0
eye morphology	optic disc	both	3.0 %	1.00
eye morphology	persistence of hyaloid vascular system	females	6.0 %	0.690
eye morphology	persistence of hyaloid vascular system	males	5.0 %	1.0
eye morphology	persistence of hyaloid vascular system	both	3.0 %	0.790
eye morphology	pupil dilation	females	2.0 %	1.0
eye morphology	pupil dilation	males	1.0 %	1.0
eye morphology	pupil dilation	both	2.0 %	1.0
eye morphology	pupil light response	females	2.0 %	1.00
eye morphology	pupil light response	males	1.0 %	1.0
eye morphology	pupil light response	both	2.0 %	1.00
eye morphology	pupil position	females	4.0 %	1.00
eye morphology	pupil position	males	11.0 %	0.230
eye morphology	pupil position	both	5.0 %	0.461
eye morphology	pupil shape	females	3.0 %	1.00
eye morphology	pupil shape	males	12.0 %	0.140
eye morphology	pupil shape	both	5.0 %	0.342
eye morphology	retina	females	10.0 %	1.0
eye morphology	retina	males	16.0 %	1.0
eye morphology	retina	both	13.0 %	1.0
eye morphology	retinal blood vessels	females	4.0 %	1.0
eye morphology	retinal blood vessels	males	2.0 %	1.0
eye morphology	retinal blood vessels	both	3.0 %	1.0
eye morphology	retinal blood vessels pattern	females	5.0 %	1.0
eye morphology	retinal blood vessels pattern	males	2.0 %	1.0
eye morphology	retinal blood vessels pattern	both	4.0 %	1.00
eye morphology	retinal blood vessels structure	females	4.0 %	1.00
eye morphology	retinal blood vessels structure	males	2.0 %	1.0
eye morphology	retinal blood vessels structure	both	3.0 %	1.00
eye morphology	retinal pigmentation	females	12.0 %	1.0
eye morphology	retinal pigmentation	males	14.0 %	1.0
eye morphology	retinal pigmentation	both	13.0 %	1.0
eye morphology	retinal structure	females	4.0 %	1.00
eye morphology	retinal structure	males	2.0 %	1.0
eye morphology	retinal structure	both	3.0 %	1.00
eye morphology	synechia	females	4.0 %	1.0
eye morphology	synechia	males	2.0 %	1.0
eye morphology	synechia	both	3.0 %	1.00
eye morphology	vitreous	females	4.0 %	1.00
eye morphology	vitreous	males	2.0 %	1.0
eye morphology	vitreous	both	3.0 %	1.00
SHIRPA	activity body position	females	1.0 %	1.0
SHIRPA	activity body position	males	2.0 %	1.0
SHIRPA	activity body position	both	1.0 %	1.00
SHIRPA	aggression	females	0.0 %	1.00
SHIRPA	aggression	males	1.0 %	1.0
SHIRPA	aggression	both	1.0 %	1.0
SHIRPA	body length	females	0.0 %	1.0
SHIRPA	body length	males	0.0 %	1.00
SHIRPA	body length	both	0.0 %	1.00
SHIRPA	body position	females	0.0 %	1.0
SHIRPA	body position	males	1.0 %	1.0
SHIRPA	body position	both	0.0 %	1.0
SHIRPA	body thickness	females	1.0 %	1.0
SHIRPA	body thickness	males	0.0 %	1.0
SHIRPA	body thickness	both	0.0 %	1.0
SHIRPA	coat color abdomen	females	3.0 %	1.00
SHIRPA	coat color abdomen	males	4.0 %	1.0
SHIRPA	coat color abdomen	both	4.0 %	1.0
SHIRPA	coat color back	females	0.0 %	1.0
SHIRPA	coat color back	males	0.0 %	1.00
SHIRPA	coat color back	both	0.0 %	1.00
SHIRPA	coat color head	females	0.0 %	1.0
SHIRPA	coat color head	males	0.0 %	1.00
SHIRPA	coat color head	both	0.0 %	1.0
SHIRPA	coat color pattern abdomen	females	1.0 %	1.0
SHIRPA	coat color pattern abdomen	males	1.0 %	1.0
SHIRPA	coat color pattern abdomen	both	1.0 %	1.0
SHIRPA	coat color pattern back	females	0.0 %	1.0
SHIRPA	coat color pattern back	males	0.0 %	1.00
SHIRPA	coat color pattern back	both	0.0 %	1.0
SHIRPA	coat color pattern head	females	0.0 %	1.0
SHIRPA	coat color pattern head	males	0.0 %	1.0
SHIRPA	coat color pattern head	both	0.0 %	1.00
SHIRPA	coat hair abdomen texture appearance	females	2.0 %	1.0
SHIRPA	coat hair abdomen texture appearance	males	2.0 %	1.0
SHIRPA	coat hair abdomen texture appearance	both	2.0 %	1.0
SHIRPA	coat hair back texture appearance	females	0.0 %	1.0
SHIRPA	coat hair back texture appearance	males	0.0 %	1.0
SHIRPA	coat hair back texture appearance	both	0.0 %	1.0
SHIRPA	coat hair distribution abdomen	females	0.0 %	1.0
SHIRPA	coat hair distribution abdomen	males	11.0 %	0.0884
SHIRPA	coat hair distribution abdomen	both	6.0 %	0.101
SHIRPA	coat hair distribution back	females	0.0 %	1.0
SHIRPA	coat hair distribution back	males	0.0 %	1.0
SHIRPA	coat hair distribution back	both	0.0 %	1.0
SHIRPA	coat hair distribution head	females	1.0 %	1.00
SHIRPA	coat hair distribution head	males	12.0 %	0.0465
SHIRPA	coat hair distribution head	both	6.0 %	0.104
SHIRPA	coat hair head texture appearance	females	0.0 %	1.00
SHIRPA	coat hair head texture appearance	males	0.0 %	1.0
SHIRPA	coat hair head texture appearance	both	0.0 %	1.0
SHIRPA	contact righting	females	5.0 %	1.0
SHIRPA	contact righting	males	5.0 %	1.00
SHIRPA	contact righting	both	5.0 %	1.00
SHIRPA	ear morphology	females	0.0 %	1.0
SHIRPA	ear morphology	males	0.0 %	1.0
SHIRPA	ear morphology	both	0.0 %	1.0
SHIRPA	fat distribution	females	0.0 %	1.0
SHIRPA	fat distribution	males	0.0 %	1.0
SHIRPA	fat distribution	both	0.0 %	1.00
SHIRPA	forelimb digit number	females	0.0 %	1.00
SHIRPA	forelimb digit number	males	0.0 %	1.0
SHIRPA	forelimb digit number	both	0.0 %	1.00
SHIRPA	forelimb digit position	females	0.0 %	1.0
SHIRPA	forelimb digit position	males	0.0 %	1.0
SHIRPA	forelimb digit position	both	0.0 %	1.0
SHIRPA	forelimb digit shape	females	0.0 %	1.0
SHIRPA	forelimb digit shape	males	0.0 %	1.0
SHIRPA	forelimb digit shape	both	0.0 %	1.0
SHIRPA	forelimb digit size	females	0.0 %	1.0
SHIRPA	forelimb digit size	males	0.0 %	1.0
SHIRPA	forelimb digit size	both	0.0 %	1.0
SHIRPA	forelimb footpads	females	0.0 %	1.0
SHIRPA	forelimb footpads	males	0.0 %	1.0
SHIRPA	forelimb footpads	both	0.0 %	1.0
SHIRPA	forelimb nail length	females	0.0 %	1.0
SHIRPA	forelimb nail length	males	0.0 %	1.0
SHIRPA	forelimb nail length	both	0.0 %	1.0
SHIRPA	forelimb nail number	females	0.0 %	1.0
SHIRPA	forelimb nail number	males	0.0 %	1.0
SHIRPA	forelimb nail number	both	0.0 %	1.0
SHIRPA	forelimb nail position	females	0.0 %	1.0
SHIRPA	forelimb nail position	males	0.0 %	1.0
SHIRPA	forelimb nail position	both	0.0 %	1.0
SHIRPA	forelimb nail shape	females	0.0 %	1.0
SHIRPA	forelimb nail shape	males	0.0 %	1.0
SHIRPA	forelimb nail shape	both	0.0 %	1.0
SHIRPA	forelimbs position	females	0.0 %	1.0
SHIRPA	forelimbs position	males	0.0 %	1.0
SHIRPA	forelimbs position	both	0.0 %	1.0
SHIRPA	forelimbs shape	females	0.0 %	1.0
SHIRPA	forelimbs shape	males	0.0 %	1.0
SHIRPA	forelimbs shape	both	0.0 %	1.0
SHIRPA	forelimbs size	females	0.0 %	1.0
SHIRPA	forelimbs size	males	0.0 %	1.0
SHIRPA	forelimbs size	both	0.0 %	1.0
SHIRPA	forepaw position	females	0.0 %	1.0
SHIRPA	forepaw position	males	0.0 %	1.0
SHIRPA	forepaw position	both	0.0 %	1.0
SHIRPA	forepaw shape	females	0.0 %	1.0
SHIRPA	forepaw shape	males	0.0 %	1.0
SHIRPA	forepaw shape	both	0.0 %	1.0
SHIRPA	forepaw size	females	0.0 %	1.0
SHIRPA	forepaw size	males	0.0 %	1.0
SHIRPA	forepaw size	both	0.0 %	1.0
SHIRPA	gait (fluidity)	females	0.0 %	1.0
SHIRPA	gait (fluidity)	males	0.0 %	1.00
SHIRPA	gait (fluidity)	both	0.0 %	1.00
SHIRPA	genitalia morphology	females	0.0 %	1.00
SHIRPA	genitalia morphology	males	0.0 %	1.0
SHIRPA	genitalia morphology	both	0.0 %	1.00
SHIRPA	genitalia presence	females	0.0 %	1.0
SHIRPA	genitalia presence	males	0.0 %	1.0
SHIRPA	genitalia presence	both	0.0 %	1.0
SHIRPA	genitalia size	females	0.0 %	1.0
SHIRPA	genitalia size	males	0.0 %	1.0
SHIRPA	genitalia size	both	0.0 %	1.0
SHIRPA	head bobbing	females	0.0 %	1.0
SHIRPA	head bobbing	males	0.0 %	1.0
SHIRPA	head bobbing	both	0.0 %	1.0
SHIRPA	head morphology	females	0.0 %	1.0
SHIRPA	head morphology	males	0.0 %	1.00
SHIRPA	head morphology	both	0.0 %	1.0
SHIRPA	head size	females	0.0 %	1.0
SHIRPA	head size	males	0.0 %	1.0
SHIRPA	head size	both	0.0 %	1.00
SHIRPA	hindlimb digit number	females	1.0 %	1.00
SHIRPA	hindlimb digit number	males	0.0 %	1.0
SHIRPA	hindlimb digit number	both	0.0 %	1.00
SHIRPA	hindlimb digit position	females	0.0 %	1.0
SHIRPA	hindlimb digit position	males	0.0 %	1.0
SHIRPA	hindlimb digit position	both	0.0 %	1.0
SHIRPA	hindlimb digit shape	females	0.0 %	1.0
SHIRPA	hindlimb digit shape	males	0.0 %	1.0
SHIRPA	hindlimb digit shape	both	0.0 %	1.0
SHIRPA	hindlimb digit size	females	0.0 %	1.00
SHIRPA	hindlimb digit size	males	0.0 %	1.0
SHIRPA	hindlimb digit size	both	0.0 %	1.00
SHIRPA	hindlimb nail length	females	0.0 %	1.0
SHIRPA	hindlimb nail length	males	0.0 %	1.0
SHIRPA	hindlimb nail length	both	0.0 %	1.00
SHIRPA	hindlimb nail number	females	0.0 %	1.0
SHIRPA	hindlimb nail number	males	1.0 %	1.0
SHIRPA	hindlimb nail number	both	0.0 %	1.00
SHIRPA	hindlimb nail position	females	0.0 %	1.0
SHIRPA	hindlimb nail position	males	0.0 %	1.0
SHIRPA	hindlimb nail position	both	0.0 %	1.0
SHIRPA	hindlimb nail shape	females	0.0 %	1.0
SHIRPA	hindlimb nail shape	males	0.0 %	1.0
SHIRPA	hindlimb nail shape	both	0.0 %	1.0
SHIRPA	hindlimbs footpads	females	0.0 %	1.0
SHIRPA	hindlimbs footpads	males	0.0 %	1.0
SHIRPA	hindlimbs footpads	both	0.0 %	1.0
SHIRPA	hindlimbs position	females	0.0 %	1.0
SHIRPA	hindlimbs position	males	0.0 %	1.0
SHIRPA	hindlimbs position	both	0.0 %	1.0
SHIRPA	hindlimbs shape	females	0.0 %	1.0
SHIRPA	hindlimbs shape	males	0.0 %	1.0
SHIRPA	hindlimbs shape	both	0.0 %	1.0
SHIRPA	hindlimbs size	females	0.0 %	1.0
SHIRPA	hindlimbs size	males	0.0 %	1.0
SHIRPA	hindlimbs size	both	0.0 %	1.0
SHIRPA	hindpaw position	females	0.0 %	1.0
SHIRPA	hindpaw position	males	0.0 %	1.0
SHIRPA	hindpaw position	both	0.0 %	1.0
SHIRPA	hindpaw shape	females	0.0 %	1.0
SHIRPA	hindpaw shape	males	0.0 %	1.0
SHIRPA	hindpaw shape	both	0.0 %	1.0
SHIRPA	hindpaw size	females	0.0 %	1.0
SHIRPA	hindpaw size	males	0.0 %	1.0
SHIRPA	hindpaw size	both	0.0 %	1.0
SHIRPA	limb grasp	females	9.0 %	1.00
SHIRPA	limb grasp	males	6.0 %	1.0
SHIRPA	limb grasp	both	7.0 %	0.624
SHIRPA	lower lip morphology	females	0.0 %	1.0
SHIRPA	lower lip morphology	males	0.0 %	1.0
SHIRPA	lower lip morphology	both	0.0 %	1.0
SHIRPA	lower teeth appearance	females	0.0 %	1.0
SHIRPA	lower teeth appearance	males	0.0 %	1.00
SHIRPA	lower teeth appearance	both	0.0 %	1.00
SHIRPA	mouth morphology	females	0.0 %	1.0
SHIRPA	mouth morphology	males	0.0 %	1.00
SHIRPA	mouth morphology	both	0.0 %	1.00
SHIRPA	salivation	females	0.0 %	1.0
SHIRPA	salivation	males	0.0 %	1.0
SHIRPA	salivation	both	0.0 %	1.0
SHIRPA	skin color back paws	females	0.0 %	1.0
SHIRPA	skin color back paws	males	0.0 %	1.0
SHIRPA	skin color back paws	both	0.0 %	1.0
SHIRPA	skin color ear	females	0.0 %	1.0
SHIRPA	skin color ear	males	0.0 %	1.0
SHIRPA	skin color ear	both	0.0 %	1.0
SHIRPA	skin color front paws	females	0.0 %	1.0
SHIRPA	skin color front paws	males	0.0 %	1.0
SHIRPA	skin color front paws	both	0.0 %	1.0
SHIRPA	skin color snout	females	0.0 %	1.0
SHIRPA	skin color snout	males	0.0 %	1.0
SHIRPA	skin color snout	both	0.0 %	1.0
SHIRPA	skin color tail	females	0.0 %	1.0
SHIRPA	skin color tail	males	0.0 %	1.0
SHIRPA	skin color tail	both	0.0 %	1.0
SHIRPA	skin color whole body	females	0.0 %	1.0
SHIRPA	skin color whole body	males	0.0 %	1.0
SHIRPA	skin color whole body	both	0.0 %	1.0
SHIRPA	skin texture back paw	females	0.0 %	1.0
SHIRPA	skin texture back paw	males	0.0 %	1.0
SHIRPA	skin texture back paw	both	0.0 %	1.0
SHIRPA	skin texture ear	females	0.0 %	1.0
SHIRPA	skin texture ear	males	0.0 %	1.0
SHIRPA	skin texture ear	both	0.0 %	1.0
SHIRPA	skin texture front paws	females	0.0 %	1.0
SHIRPA	skin texture front paws	males	0.0 %	1.0
SHIRPA	skin texture front paws	both	0.0 %	1.0
SHIRPA	skin texture snout	females	0.0 %	1.0
SHIRPA	skin texture snout	males	0.0 %	1.0
SHIRPA	skin texture snout	both	0.0 %	1.0
SHIRPA	skin texture tail	females	0.0 %	1.0
SHIRPA	skin texture tail	males	0.0 %	1.0
SHIRPA	skin texture tail	both	0.0 %	1.0
SHIRPA	skin texture whole body	females	0.0 %	1.0
SHIRPA	skin texture whole body	males	0.0 %	1.00
SHIRPA	skin texture whole body	both	0.0 %	1.00
SHIRPA	snout size	females	0.0 %	1.0
SHIRPA	snout size	males	1.0 %	1.0
SHIRPA	snout size	both	0.0 %	1.0
SHIRPA	startle response	females	0.0 %	1.00
SHIRPA	startle response	males	0.0 %	1.00
SHIRPA	startle response	both	0.0 %	1.00
SHIRPA	tail curvature	females	0.0 %	1.00
SHIRPA	tail curvature	males	0.0 %	1.0
SHIRPA	tail curvature	both	0.0 %	1.0
SHIRPA	tail elevation	females	1.0 %	1.00
SHIRPA	tail elevation	males	2.0 %	1.0
SHIRPA	tail elevation	both	1.0 %	1.0
SHIRPA	tail length	females	0.0 %	1.0
SHIRPA	tail length	males	0.0 %	1.0
SHIRPA	tail length	both	0.0 %	1.00
SHIRPA	tail morphology	females	0.0 %	1.00
SHIRPA	tail morphology	males	12.0 %	0.0177
SHIRPA	tail morphology	both	6.0 %	0.0263
SHIRPA	tail presence	females	0.0 %	1.0
SHIRPA	tail presence	males	0.0 %	1.0
SHIRPA	tail presence	both	0.0 %	1.0
SHIRPA	tail shape	females	0.0 %	1.0
SHIRPA	tail shape	males	0.0 %	1.0
SHIRPA	tail shape	both	0.0 %	1.00
SHIRPA	tail thickness	females	0.0 %	1.0
SHIRPA	tail thickness	males	0.0 %	1.0
SHIRPA	tail thickness	both	0.0 %	1.0
SHIRPA	teeth presence	females	0.0 %	1.0
SHIRPA	teeth presence	males	0.0 %	1.00
SHIRPA	teeth presence	both	0.0 %	1.00
SHIRPA	transfer arousal	females	12.0 %	0.0876
SHIRPA	transfer arousal	males	2.0 %	1.00
SHIRPA	transfer arousal	both	6.0 %	0.202
SHIRPA	tremor	females	0.0 %	1.0
SHIRPA	tremor	males	0.0 %	1.0
SHIRPA	tremor	both	0.0 %	1.00
SHIRPA	trunk curl	females	0.0 %	1.00
SHIRPA	trunk curl	males	0.0 %	1.0
SHIRPA	trunk curl	both	0.0 %	1.0
SHIRPA	unexpected behaviors (circling, head bobbing, jumping, retropulsion)	females	0.0 %	1.0
SHIRPA	unexpected behaviors (circling, head bobbing, jumping, retropulsion)	males	0.0 %	1.0
SHIRPA	unexpected behaviors (circling, head bobbing, jumping, retropulsion)	both	0.0 %	1.00
SHIRPA	upper lip morphology	females	0.0 %	1.0
SHIRPA	upper lip morphology	males	0.0 %	1.0
SHIRPA	upper lip morphology	both	0.0 %	1.0
SHIRPA	upper teeth appearance	females	0.0 %	1.0
SHIRPA	upper teeth appearance	males	0.0 %	1.0
SHIRPA	upper teeth appearance	both	0.0 %	1.00
SHIRPA	vibrissae appearance	females	2.0 %	1.0
SHIRPA	vibrissae appearance	males	1.0 %	1.0
SHIRPA	vibrissae appearance	both	1.0 %	1.0
SHIRPA	vibrissae presence	females	2.0 %	1.00
SHIRPA	vibrissae presence	males	1.0 %	1.0
SHIRPA	vibrissae presence	both	2.0 %	1.0
SHIRPA	vocalization	females	2.0 %	1.00
SHIRPA	vocalization	males	2.0 %	1.0
SHIRPA	vocalization	both	2.0 %	1.00

GENOTYPE CORRELATION PLOT

Correlate Rexo1^em1(IMPC)J/Mmjax -/+ with genotype:

This genotype correlation visualization can include both EAP and LAP measures.